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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs58134413 chr7:64490841 G/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs5821632 chr17:63043779 CT/C AMZ2P1 chr17:62962668-62971694:- 0.91 5.29 2.47E-6 Box Plot
ACC rs5832868 chr2:99798066 CT/C TSGA10 chr2:99613724-99771427:- 0.53 5.06 5.68E-6 Box Plot
ACC rs584152 chr1:245196916 G/A EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs5841602 chr20:44367071 CA/C WFDC3 chr20:44376583-44420571:- 0.87 6.37 4.95E-8 Box Plot
ACC rs5844574 chr22:24256102 GC/G GSTT1 chr22:24376133-24384680:- 0.81 8.19 6.38E-11 Box Plot
ACC rs5844574 chr22:24256102 GC/G LOC391322 chr22:24373117-24374043:+ 0.8 8.23 5.45E-11 Box Plot
ACC rs58511951 chr17:62976405 T/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs586013 chr1:245191893 C/T EFCAB2 chr1:245133007-245290466:+ 0.66 5.76 4.53E-7 Box Plot
ACC rs58668900 chr14:74293008 G/A LIN52 chr14:74551499-74667938:+ 0.49 5.34 2.11E-6 Box Plot
ACC rs58671384 chr17:62976596 A/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs5869740 chr5:96252943 TG/T ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs5877945 chr6:86393470 A/AT SNHG5 chr6:86370668-86388454:- 0.67 5.12 4.53E-6 Box Plot
ACC rs5892245 chr8:71928331 AT/A XKR9 chr8:71581600-71702606:+ 0.65 6.17 1.03E-7 Box Plot
ACC rs589458 chr9:98640671 A/G C9orf130 chr9:98568372-98638259:- 0.61 5.49 1.2E-6 Box Plot